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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10956975_10957041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10956975 - 10957041

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCACGCTGACCC

Flanking Amino Acid:

KGDRGSPGEKGERGQDGVGL

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.8

39.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

78.5

0.64

0.9

69.2

41.8

Minor 5ss

31.6

-2.1

3.3

40.8

45.6

Minor BPS

40.8

-0.7

45.12

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912