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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10957441_10957738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10957441 - 10957738

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GGTGGCTGATGC

Flanking Amino Acid:

EGRPGHAGFPGPVGPKGDQG

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.1

42.1

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

80.8

0.69

0.9

76.4

32.2

Minor 5ss

34.6

-1.7

2.8

45.3

Minor BPS

37.2

-0.9

2.2

44.41

43.3

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629