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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10957802_10957889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10957802 - 10957889

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCTT

5'SS Class:

major

3'SS Sequence:

TGCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATCCAT

U12 Branch Point Sequence:

CCACCCCCAATT

Flanking Amino Acid:

PGLQGSPGLKGEKGEPGVII

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.2

73.4

43.3

Major BPS

60.7

0.27

1.2

70.5

35.7

Major PPT

82.7

0.74

0.8

77.3

31.5

Minor 5ss

42.2

-0.9

3.5

64.9

46.4

Minor BPS

45.9

-0.2

1.9

59.35

43.8

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629