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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10958234_10958392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10958234 - 10958392

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGACCC

5'SS Class:

major

3'SS Sequence:

TGCTCATCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

ATGTGCTCATCC

Flanking Amino Acid:

KGEIGFPGRPGRPGMNGLKG

Intron Amino Acid Position:

953

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.4

54.7

42.9

Major BPS

79.7

0.74

79.6

35.6

Major PPT

71.9

0.49

0.9

65.2

35.3

Minor 5ss

35.1

-1.7

3.1

39.9

Minor BPS

46.6

-0.2

2.2

60.88

44.4

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629