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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10958751_10958866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10958751 - 10958866

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TGCATCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

GTCCCCACAGCT

Flanking Amino Acid:

PGSIVYDSNNAFSDASRPAL

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

77.8

38.7

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

0.43

0.9

62.1

34.6

Minor 5ss

33.4

-1.9

2.8

41.6

38.2

Minor BPS

44.8

-0.3

64.09

45.3

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629