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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10958910_10959010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10958910 - 10959010

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

CTGCTCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGGCCTCTGAGG

Flanking Amino Acid:

ASRPALPAFPGFPQFPGQKG

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.7

46.2

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

69.1

0.43

65.4

36.1

Minor 5ss

28.2

-2.5

3.4

29.1

43.5

Minor BPS

42.4

-0.7

1.9

45.23

41.3

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912