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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10959678_10959753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10959678 - 10959753

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

CCCACCTCACCT

Flanking Amino Acid:

PPSFPGPHRPAISIPGPPGP

Intron Amino Acid Position:

1138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

78.5

0.64

0.7

70.1

30.8

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

47.1

-0.1

1.9

60.31

48.9

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912