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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10959828_10959916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10959828 - 10959916

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

GCCATCTGAGCG

Flanking Amino Acid:

PPGSSGTSLGLRALPTYQAM

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

43.3

-0.6

1.7

41.21

43.1

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629