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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10960046_10960133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10960046 - 10960133

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GCGCGCTCACGT

Flanking Amino Acid:

RLRGGFRRVLLEEHTLVPSS

Intron Amino Acid Position:

1206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

76.7

0.6

0.9

69.4

36.8

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

-0.9

2.1

45.76

45.5

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629