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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10960542_10960624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10960542 - 10960624

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCCCCTTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTCCCTCACGC

Flanking Amino Acid:

AHVHQDFQPALHLVALNAPL

Intron Amino Acid Position:

1308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

74.5

0.55

0.9

71.7

32.7

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

46.6

-0.2

2.1

61.01

43.9

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629