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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10960823_10960946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10960823 - 10960946

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TTCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

ATGGGCTGACCC

Flanking Amino Acid:

RATVPIVNLRDEVLFSNWEA

Intron Amino Acid Position:

1374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

54.6

Major BPS

48.9

-0

1.3

39.1

Major PPT

74.8

0.56

0.8

35.9

Minor 5ss

30.5

-2.2

3.4

34.3

41.5

Minor BPS

42.8

-0.5

2.1

53.06

44.6

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038777

10933902 - 10961530

27629

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912