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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10961063_10961316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10961063 - 10961316

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GCAGCCTCACCC

Flanking Amino Acid:

DGRDVLRDSAWPQKSVWHGS

Intron Amino Acid Position:

1412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

78.6

0.64

0.8

37.1

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

45.9

-0.3

1.9

52.02

44.9

Associated Gene:

Gene:

COL18A1

Ensembl Gene ID:

ENSAPLG00000019001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038542

10933902 - 10961530

27629

ENSAPLT00000019431

10946619 - 10961530

14912

ENSAPLT00000038777

10933902 - 10961530

27629