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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10975540_10976466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10975540 - 10976466

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTGTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTCCAT

U12 Branch Point Sequence:

GCCTCCGTAACT

Flanking Amino Acid:

PGPKGDAGEPGRPGDMGPVG

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

74.5

37.6

Major BPS

55.9

0.15

1.3

66.4

39.9

Major PPT

82.1

0.72

0.8

73.6

37.1

Minor 5ss

36.9

-1.5

2.7

46.9

41.8

Minor BPS

61.1

0.43

2.1

76.24

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017554

10973567 - 10987443

13877

ENSAPLT00000002359

10973567 - 10988063

14497