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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10976637_10976964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10976637 - 10976964

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GGGGTCTGACCT

Flanking Amino Acid:

KGDKGSRGEKGSRGAKGAKG

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

63.7

0.34

1.2

41.8

Major PPT

88.5

0.87

0.7

83.8

24.3

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.2

-0.2

1.8

57.66

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017554

10973567 - 10987443

13877

ENSAPLT00000002359

10973567 - 10988063

14497