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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10977139_10977339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10977139 - 10977339

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACGTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GCACCACTCACA

Flanking Amino Acid:

RGIDGIDGMKGEAGYPGLPG

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

36.9

Major BPS

64.9

0.37

29.8

Major PPT

71.8

0.49

0.9

64.8

36.6

Minor 5ss

40.3

-1.1

3.5

58.3

46.6

Minor BPS

40.5

-0.7

2.1

48.78

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017554

10973567 - 10987443

13877

ENSAPLT00000002359

10973567 - 10988063

14497