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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10977742_10978282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10977742 - 10978282

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TCCTTGTTCACA

Flanking Amino Acid:

PGAYGPKGGKGEPGEDGKPG

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

77.5

0.62

0.9

72.7

37.5

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

-0.2

2.4

61.69

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017554

10973567 - 10987443

13877

ENSAPLT00000002359

10973567 - 10988063

14497