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Intron Name: Anas_platyrhynchos_platyrhynchos_7_10978346_10978465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10978346 - 10978465

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

AACCCACTGATT

Flanking Amino Acid:

QGIPGSPGEKGAPGNRGEPG

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

71.2

0.53

37.5

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

44.1

-0.3

1.8

57.93

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017554

10973567 - 10987443

13877

ENSAPLT00000002359

10973567 - 10988063

14497