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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11021302_11026087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11021302 - 11026087

Intron Length:

4786

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCGATGGTG

5'SS Class:

weak_major

3'SS Sequence:

TCTCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATGAC

U12 Branch Point Sequence:

GAGCCAATGACC

Flanking Amino Acid:

DENTIERIIKGDPGRPGRSG

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.3

62.6

39.6

Major BPS

54.6

0.12

1.1

47.1

36.1

Major PPT

85.7

0.8

83.9

31.1

Minor 5ss

18.8

-3.6

4.1

28.6

37.7

Minor BPS

44.5

-0.4

1.8

51.69

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001031

11015924 - 11026159

10236