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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11060080_11060580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11060080 - 11060580

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ACTTCCTCAGTC

Flanking Amino Acid:

IRSSMSPVQGAGSQAGCELL

Intron Amino Acid Position:

2054

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

71.6

40.1

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

79.7

0.67

0.9

72.4

37.7

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

54.6

0.12

1.8

65.03

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015902

11058961 - 11084463

25503

ENSAPLT00000029100

11058961 - 11084463

25503