Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11065025_11065725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11065025 - 11065725

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

GGGTTTCCAACC

Flanking Amino Acid:

SINDLQGSKRIAAAVGWLVS

Intron Amino Acid Position:

1677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

70.2

0.45

65.4

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

45.1

-0.3

1.8

52.44

38.7

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015902

11058961 - 11084463

25503

ENSAPLT00000029100

11058961 - 11084463

25503