Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11069964_11070466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11069964 - 11070466

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTTTGAATT

Flanking Amino Acid:

TVQEASANELKCALERDRQA

Intron Amino Acid Position:

1323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

78.2

36.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

67.1

0.38

67.7

42.7

Minor 5ss

37.8

-1.4

2.7

44.3

36.8

Minor BPS

66.3

0.59

1.3

79.83

36.8

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029100

11058961 - 11084463

25503

ENSAPLT00000015902

11058961 - 11084463

25503