Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11070581_11071153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11070581 - 11071153

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

ATTTGTGTAAAT

Flanking Amino Acid:

KEERRRVEEERQRQEREQLI

Intron Amino Acid Position:

1285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

78.2

0.63

0.8

36.6

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

-0

2.4

75.14

41.9

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029100

11058961 - 11084463

25503

ENSAPLT00000015902

11058961 - 11084463

25503