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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11082029_11082542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11082029 - 11082542

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTCCTGCTAATA

Flanking Amino Acid:

KMAILHFFDHASAALAKKKA

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

88.9

0.88

0.7

81.2

36.5

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

42.7

-0.5

2.2

53.52

39.1

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015902

11058961 - 11084463

25503

ENSAPLT00000029100

11058961 - 11084463

25503