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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11082767_11082851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11082767 - 11082851

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GCATCCTGACCT

Flanking Amino Acid:

VVEGREPARADVPPGSAGRR

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

79.2

0.66

0.9

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

55.5

0.25

1.8

70.66

45.6

Associated Gene:

Gene:

MCM3AP

Ensembl Gene ID:

ENSAPLG00000015213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029100

11058961 - 11084463

25503

ENSAPLT00000015902

11058961 - 11084463

25503