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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11089344_11089877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11089344 - 11089877

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAAGTATTAAAG

Flanking Amino Acid:

HYNEDWTQMKVKTGTALGGP

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

85.5

0.8

0.6

85.3

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

47.2

-0.3

1.8

51.75

42.1

Associated Gene:

Gene:

POFUT2

Ensembl Gene ID:

ENSAPLG00000015047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039177

11083879 - 11092259

8381

ENSAPLT00000015720

11083556 - 11092259

8704