Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11189856_11194405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11189856 - 11194405

Intron Length:

4550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTTCTGATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATTTCTGATTT

Flanking Amino Acid:

MKLRKERWLQKIESVKLAKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

72.5

0.51

39.4

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

58.9

0.36

1.7

77.68

38.9

Associated Gene:

Gene:

FAM207A

Ensembl Gene ID:

ENSAPLG00000015590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047555

11184747 - 11228384

43638

ENSAPLT00000023934

11182047 - 11228342

46296

ENSAPLT00000016247

11182047 - 11228342

46296