Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11240955_11241542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11240955 - 11241542

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTCCTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTCTCCTCACAC

Flanking Amino Acid:

DNMYKKSNEFDYPSVGQLVQ

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.54

0.8

68.7

30.6

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

48.1

-0.1

59.51

45.4

Associated Gene:

Gene:

ITGB2

Ensembl Gene ID:

ENSAPLG00000014857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015534

11238374 - 11245263

6890