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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11242763_11243584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11242763 - 11243584

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCACGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ATGACCCAGACT

Flanking Amino Acid:

GKGNVVCGICSCNSGYTGKN

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

72.7

0.56

30.1

Major PPT

66.6

0.37

62.2

33.2

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

46.8

-0.1

67.04

43.6

Associated Gene:

Gene:

ITGB2

Ensembl Gene ID:

ENSAPLG00000014857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015534

11238374 - 11245263

6890