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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11250353_11251491_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11250353 - 11251491

Intron Length:
1139

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGTGTC

5'SS Class:
major

3'SS Sequence:
GTTTTGCCTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGTGAA

U12 Branch Point Sequence:
TTTTGCCTGAAG

Flanking Amino Acid:
YFPDSIPLIGERELKHDYFL

Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1
73.4
36.4

Major BPS
55.5
0.14
1.1
47.1
37.9

Major PPT
69
0.43
1.1
68.6
37.6

Minor 5ss
38.5
-1.3
3.3
49.1
41.3

Minor BPS
47.8
-0.3
2.3
64.71
43

Associated Gene:

Gene:
KMO

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11248394 - 11260414
12021