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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11252839_11253488_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11252839 - 11253488

Intron Length:
650

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTCCC

5'SS Class:
strong_major

3'SS Sequence:
CTCCTGCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTTAT

U12 Branch Point Sequence:
TTCCAAGGGACT

Flanking Amino Acid:
NAKLGTLTINRSDQPPLEVT

Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.9
1.03
0.8
78.8
35.5

Major BPS
63.5
0.34
1.4
57.4
49.1

Major PPT
74.8
0.56
0.8
65.2
36.3

Minor 5ss
35.5
-1.6
2.8
45.4
42.6

Minor BPS
37.9
-0.8
2.3
59.83
43.1

Associated Gene:

Gene:
KMO

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11248394 - 11260414
12021