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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11253577_11254956_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11253577 - 11254956

Intron Length:
1380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTTTC

5'SS Class:
strong_major

3'SS Sequence:
TGTCTTTTCACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGTACAA

U12 Branch Point Sequence:
TGTCTTTTCACA

Flanking Amino Acid:
RANLNRELLTAAEKYSNTRL

Intron Amino Acid Position:
121

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.7
1.12
0.6
91.3
19.2

Major BPS
49.8
-0
1.1
58.8
38.1

Major PPT
84.2
0.77
0.8
79.4
32.6

Minor 5ss
44.8
-0.6
2.8
61.1
43.8

Minor BPS
55.9
0.18
1.7
68.82
37.6

Associated Gene:

Gene:
KMO

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11248394 - 11260414
12021