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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11255656_11255931_R


Intron Information:

Intron Rank:
3

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
11255656 - 11255931

Intron Length:
276

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCCTCA

5'SS Class:
weak_major

3'SS Sequence:
CCTTCTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTCTAT

U12 Branch Point Sequence:
CTCCCTTCTATT

Flanking Amino Acid:
ALQAVGMEEQIVSKGIPMHA

Intron Amino Acid Position:
75

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.3
0.38
1.2
59.7
42.1

Major BPS
61.5
0.29
1.3
62.1
44.1

Major PPT
83.6
0.75
0.8
81
29.4

Minor 5ss
48.6
-0.1
2.8
66.1
44.9

Minor BPS
46
-0.2
1.8
61.04
43.2

Associated Gene:

Gene:
KMO

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11248394 - 11260414
12021