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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11258776_11260360_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11258776 - 11260360

Intron Length:
1585

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGGAAAT

5'SS Class:
major

3'SS Sequence:
CCTTCTCTTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACTTCAT

U12 Branch Point Sequence:
CATTCCTGATCC

Flanking Amino Acid:
KRVAIVGGGLVGALNACFFA

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1
73.4
37.3

Major BPS
78.6
0.71
1
79.6
32.9

Major PPT
81.5
0.71
0.7
76.8
25.2

Minor 5ss
33.9
-1.8
3.3
45.4
44

Minor BPS
58.6
0.25
1.8
68.63
42.5

Associated Gene:

Gene:
KMO

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11248394 - 11260414
12021