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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11293664_11295666_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11293664 - 11295666

Intron Length:

2003

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAGAATT

5'SS Class:

major

3'SS Sequence:

GGGGAGGTGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTAAAA

Flanking Amino Acid:

KEKEDLKSKYQETTKCVCFN

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.4

76.7

38.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

42.9

-0.4

1.2

29.3

41.1

Minor 5ss

31.3

-2.1

4.2

55.2

42.8

Minor BPS

66.3

0.51

1.5

76.26

34.1

Associated Gene:

Gene:

PCNT

Ensembl Gene ID:

ENSAPLG00000013024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013637

11281234 - 11354866

73633