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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11300382_11305109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11300382 - 11305109

Intron Length:

4728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATGCCTTTAAAA

Flanking Amino Acid:

VMSQDQAGGISSVTVFGETA

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.8

34.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.79

0.6

84.9

22.7

Minor 5ss

45.6

-0.5

2.9

64.6

46.7

Minor BPS

63.9

0.43

1.4

68.61

37.4

Associated Gene:

Gene:

PCNT

Ensembl Gene ID:

ENSAPLG00000013024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013637

11281234 - 11354866

73633