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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11309223_11310294_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11309223 - 11310294

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GGAAATAATGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATTCTTTCAACT

Flanking Amino Acid:

CALKLTEAQNKFMEEHKAMT

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

49.8

-0

1.1

41.2

42.6

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

63.4

0.5

1.5

79.81

35.9

Associated Gene:

Gene:

PCNT

Ensembl Gene ID:

ENSAPLG00000013024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013637

11281234 - 11354866

73633