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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11349248_11350827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11349248 - 11350827

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAAATTTTAATG

Flanking Amino Acid:

KPVVETSSPKLQKLYRKYLR

Intron Amino Acid Position:

3193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

58.4

0.12

1.3

57.57

38.3

Associated Gene:

Gene:

PCNT

Ensembl Gene ID:

ENSAPLG00000013024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013637

11281234 - 11354866

73633