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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11417580_11419258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11417580 - 11419258

Intron Length:

1679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCATCATCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATTTCTTTGATT

Flanking Amino Acid:

TGKAIYTLTYGKLWSRSLKL

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

0.85

0.9

39.9

Major PPT

66.9

0.38

0.9

63.1

38.3

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

88.92

28.9

Associated Gene:

Gene:

DIP2A

Ensembl Gene ID:

ENSAPLG00000011466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036440

11382736 - 11457229

74494

ENSAPLT00000012187

11382736 - 11457229

74494

ENSAPLT00000048272

11382736 - 11457229

74494

ENSAPLT00000036772

11382736 - 11438032

55297