Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11445966_11447122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11445966 - 11447122

Intron Length:

1157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTAACCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

GLGTQTDMLRMKGVNLSCVR

Intron Amino Acid Position:

1290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

79.5

0.73

0.9

36.9

Major PPT

74.5

0.55

0.9

70.7

35.6

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

DIP2A

Ensembl Gene ID:

ENSAPLG00000011466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036440

11382736 - 11457229

74494

ENSAPLT00000012187

11382736 - 11457229

74494

ENSAPLT00000048272

11382736 - 11457229

74494