Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_11447294_11450446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11447294 - 11450446

Intron Length:

3153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTTCTGTTGATT

Flanking Amino Acid:

CRVNVAICLQGTAGPDPTTV

Intron Amino Acid Position:

1347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

82.9

23.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.1

0.63

0.8

73.3

36.2

Minor 5ss

36.1

-1.6

3.2

46.9

48.4

Minor BPS

49.5

0.04

2.1

71.41

40.3

Associated Gene:

Gene:

DIP2A

Ensembl Gene ID:

ENSAPLG00000011466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048272

11382736 - 11457229

74494

ENSAPLT00000036440

11382736 - 11457229

74494

ENSAPLT00000012187

11382736 - 11457229

74494