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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11475603_11475955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11475603 - 11475955

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

GTGCTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

GTGCTCTCAACA

Flanking Amino Acid:

SVQLPDGGWGLHVEDKSTVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

38.3

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

67.9

0.4

62.4

38.6

Minor 5ss

33.2

-1.9

2.8

42.7

38.4

Minor BPS

57.9

0.25

1.6

65.78

40.3

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166