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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11476078_11476311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11476078 - 11476311

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTCT

5'SS Class:

major

3'SS Sequence:

TCCATCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

GCTGCATTAACA

Flanking Amino Acid:

VRARVNLHSKGGAVGIPSWG

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.3

72.3

40.1

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

78.9

0.65

0.8

72.9

31.8

Minor 5ss

41.9

-0.9

2.9

57.6

46.6

Minor BPS

61.4

0.35

1.8

69.26

42.8

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166