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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11477384_11477605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11477384 - 11477605

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

ATCACCTGTATT

Flanking Amino Acid:

EDELIRSLRQELYVQDYASI

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

75.6

0.58

69.5

41.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

49.2

0.02

1.8

67.89

43.1

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166