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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11480870_11481666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11480870 - 11481666

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ATCCCCTCACTC

Flanking Amino Acid:

PERLFDAVNVLLSMRNSDGG

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.8

0.63

0.9

72.8

37.5

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

48.2

-0.1

1.8

58.36

40.8

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166