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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11481764_11481936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11481764 - 11481936

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTGCACTGATAT

Flanking Amino Acid:

LELLNPSEVFGDIMIDYTYV

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

65.8

Major BPS

71.2

0.53

37.5

Major PPT

66.1

0.36

1.1

61.1

40.1

Minor 5ss

28.7

-2.4

3.5

34.8

43.6

Minor BPS

45.1

-0.2

1.9

65.18

44.3

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166