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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11482043_11482099_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11482043 - 11482099

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CAATGACCCACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAAAC

U12 Branch Point Sequence:

GCCACAATGACC

Flanking Amino Acid:

TYPEHRAPEISACSVCFTYG

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

47.7

-0.1

51.4

28.5

Major PPT

59.8

0.22

50.8

37.9

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

43.7

-0.5

1.9

49.65

40.4

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166