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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11482111_11483007_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11482111 - 11483007

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCTCTGCT

5'SS Class:

weak_major

3'SS Sequence:

AGGAGCTGGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TCCCTCCTAGGA

Flanking Amino Acid:

HRAPEISACSVCFTYGTWFG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.3

61.6

41.6

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

39.8

-0.5

1.7

31.5

41.4

Minor 5ss

32.2

-2

4.1

47.6

43.2

Minor BPS

40.9

-0.6

48.54

42.2

Associated Gene:

Gene:

LSS

Ensembl Gene ID:

ENSAPLG00000010494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011004

11475322 - 11484487

9166