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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11491199_11491683_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11491199 - 11491683

Intron Length:
485

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTAAGTATC

5'SS Class:
major

3'SS Sequence:
CAATTTCTTCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
TTATACCTAACA

Flanking Amino Acid:
TLDPAAIASFLYFTALILSL

Intron Amino Acid Position:
231

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
78.6
35.6

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
78.6
0.64
0.9
69.7
41

Minor 5ss
43.2
-0.7
2.9
64.8
39.3

Minor BPS
64
0.44
1.9
78.65
36.9

Associated Gene:

Gene:
TMEM237

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11488810 - 11495784
6975