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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11491758_11492729_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11491758 - 11492729

Intron Length:
972

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAAATCT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTGTAATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAT

U12 Branch Point Sequence:
TTTTTTGTAATC

Flanking Amino Acid:
LSISTVSAFDRIDLAKASVA

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
0.9
77.5
31.3

Major BPS
84.4
0.85
1
84
34.5

Major PPT
78.3
0.64
1
78.8
38.7

Minor 5ss
39.9
-1.1
3.2
57.4
46.8

Minor BPS
61.9
0.35
2
77
33.7

Associated Gene:

Gene:
TMEM237

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11488810 - 11495784
6975