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Intron Name: Anas_platyrhynchos_platyrhynchos_7_11506431_11507351_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11506431 - 11507351

Intron Length:

921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTATGTAGC

5'SS Class:

weak_major

3'SS Sequence:

TCTCTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTACTTGCAATT

Flanking Amino Acid:

NPREFQSAVPHTTRVQKSYE

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.3

61.5

43.2

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

85.2

0.79

0.8

36.1

Minor 5ss

43.7

-0.7

2.5

54.5

37.2

Minor BPS

45.1

-0.2

2.1

65.72

39.5

Associated Gene:

Gene:

MPP4

Ensembl Gene ID:

ENSAPLG00000009743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040303

11502598 - 11522288

19691

ENSAPLT00000026246

11502598 - 11522288

19691

ENSAPLT00000010168

11502598 - 11522288

19691

ENSAPLT00000044940

11502598 - 11522288

19691

ENSAPLT00000044348

11502598 - 11522288

19691